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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015817312.1_cds_XP_016499129.1_13084
CDS Infomation

[gene=LOC107817773] [db_xref=GeneID:107817773] [protein=long chain acyl-CoA synthetase 1-like] [protein_id=XP_016499129.1] [location=join(71331..71482,72361..72424,72525..72614,72715..72771,72874..72922,73057..73133,73249..73288,74484..74578,74711..74878,75116..75226,75313..75400,75491..75557,75644..75719,76074..76191,76353..76598,76696..76835,76936..77118,77200..77319,77424..77474)] [gbkey=CDS]
Sequence

ATGAGCATGAGCATGTTTGGTTTGAAAGTGGAGGAGGGAAAAGAAGGCCAAAATGGACAG
CCATCAGTTGGTCCTGTTTATCGAAATCCAATAGCTAAAAATGGTTTTCCTCCAACTGAT
CCTGATTTGTCTACAGCTTGGCAACTTTTTAGAGCAGCTGTTGAAAAATATCCAGGGAAT
AAGATGCTGGGATGGCGTGATTTTAAGGATGGAAAGTGGGGTCCTTATCTCTGGAAAACA
TACAAAGAAGCTTATGTAGAGATTTTGCAGACTGGTTCTGCATTACGGGCTCACGGTATT
GAACCTGGTGCTCGAATTGGAATTTATGGATCCAATTGTCCTCAGTGGATAGTAGCAATG
CAGGCTTGCAGTGCACACAGCTTAATATGTGTCCCTCTCTATGATACACTTGGACCGGGC
GCTGTAGATTTTATTATTGAACATGCCGAGATTGATATCGTTTTTGTTCAAGATAAGAAA
GTGAAAGAACTTTTAAATTCAGAGTGCACACATGCTAAACGCCTGAAATTGCTTGTGTGT
TTCACTTCACTGCAGCAGGAAGAGAAGGATAAGGCAGTTTCTATGGGTATTAAGCCATAC
TCTTGGAATGAATTCCTCAATATGGGCAAAGAGAATCCATTGGAGCCTTCACCGCCGCAG
CCATTAAACATATGTACAATCATGTATACTAGTGGAACAAGCGGAGAACCTAAAGGTGTA
ATATTGACTCATGAAAATATGACAGCATCTGTAACAGGAGTTGATCATTTTATGGAAGAA
TTTGAAGACAAGATGACGCCGGATGATGTGTACATATCTTTCCTACCACTTGCTCATATA
CTTGATCGGATGATTGAAGAATTCTTCTTTCATAGGGGTGCTTCTGTTGGCTACTACCAT
GGGAATATCAATGAGATACAAGAAGACCTGATGGAGTTGAAGCCAACTTTTTTGGCTGGA
GTACCTCGGGTTTATGAAAAGATTCACGAAGGTGTTTTGAAAGCACTTGGAGAACTCAAT
CCCTTTAGGAGGAGCATGTTCCACATTCTATATAACTACAAACTCAAATGGATGAAGCTT
GGGTACAAACAGAAGTATGCTTCACCATTGGCTGATCTGCTAGCTTTTAGGAAGGTAAAG
AATAGGTTAGGTGGCCGGATTCGCCTAATAGTCTCTGGTGGTGCTCCCTTAGGCACTGAG
GTGGAAGAATTCTTGCGTGTTACCTCCTGTGGCTTCGTCCTCCAAGGCTATGGTTTGACG
GAGACTTGTGGTTTGGCCACCATTGGGCATCCAGATGAAATGTCCATGCTTGGAACGGTT
GGTCCACCATTTGTCTTCACAGAAGTGCGTTTGGAGGAAGTTCCAGAAATGGGCTATGAT
CCCCTAGGAGATCCTTCTCGGGGAGAGATATGCGTGAGAGGGAGGACCGCTTTTACTGGA
TACTACAAGAATCCAGAATTGACAAGAGAGGTCATCAAAGACGGGTGGTTTCATACAGGT
GACATCGGAGAAATGTTGCCTAATGGAGTTGTAAAAATCATTGATAGAAAGAAAAATGTT
ATAAAGCTATCTCAAGGAGAATATGTTGCAATGGAATATCTGGAAAAGGTTTATGGTATT
GCGCCCATCATTGAAGATATATGGGTATATGGGGACAGCTTCAAGTCCATGTTGGTGGCA
GTTGTGGTGCCACACGAAGGAAACGCCAAAAAATGGGCCGATCAAAATGGACACAAGGGT
TCAATTCCTGAACTTTGTTCTCTCCAAGAGCTAAATCAATATATCTTCCTTGAGCTGAAA
ACTGCTGCAGAAAGGAACAAGCTAAGAGGTTTCGAGTACATCAAAGGCGTGATTCTAGAA
CCTCAACCCTTTGAGTTTAACCAGGACTTGGTAACAGCAACAATGAAAAAAAGAAGGGAG
AGATTGCTTAAGCATTACAAGGTGGAAATTGATAATCTCTACCAAAGGCTTAATGCAGTA
CCTAAACGCTAA

Peptide Sequence

PEP ID

XP_016499129.1
PEP Infomation

PREDICTED: long chain acyl-CoA synthetase 1-like [Nicotiana tabacum]
Sequence

MSMSMFGLKVEEGKEGQNGQPSVGPVYRNPIAKNGFPPTDPDLSTAWQLFRAAVEKYPGN
KMLGWRDFKDGKWGPYLWKTYKEAYVEILQTGSALRAHGIEPGARIGIYGSNCPQWIVAM
QACSAHSLICVPLYDTLGPGAVDFIIEHAEIDIVFVQDKKVKELLNSECTHAKRLKLLVC
FTSLQQEEKDKAVSMGIKPYSWNEFLNMGKENPLEPSPPQPLNICTIMYTSGTSGEPKGV
ILTHENMTASVTGVDHFMEEFEDKMTPDDVYISFLPLAHILDRMIEEFFFHRGASVGYYH
GNINEIQEDLMELKPTFLAGVPRVYEKIHEGVLKALGELNPFRRSMFHILYNYKLKWMKL
GYKQKYASPLADLLAFRKVKNRLGGRIRLIVSGGAPLGTEVEEFLRVTSCGFVLQGYGLT
ETCGLATIGHPDEMSMLGTVGPPFVFTEVRLEEVPEMGYDPLGDPSRGEICVRGRTAFTG
YYKNPELTREVIKDGWFHTGDIGEMLPNGVVKIIDRKKNVIKLSQGEYVAMEYLEKVYGI
APIIEDIWVYGDSFKSMLVAVVVPHEGNAKKWADQNGHKGSIPELCSLQELNQYIFLELK
TAAERNKLRGFEYIKGVILEPQPFEFNQDLVTATMKKRRERLLKHYKVEIDNLYQRLNAV
PKR

Transcript Sequence

Gene sequence data has not been registered.